2023

  • Paoletti, M., Fournier, G., Dolan, E., and Saito, M. (2023). Metaproteogenomic Profile of a Mesopelagic Adenylylsulfate Reductase: Course-Based Discovery Using the Ocean Protein Portal. J. Proteome Res. 22(9), doi: 10.1021/acs.jproteome.3c00152. [This article has been published as OPEN ACCESS].

  • Peña-Montenegro, T., Kleindienst, S., Allen, A., Murat Eren, A., McCrow, J., Sánchez-Calderón, J., et al. (2023). Species-specific responses of marine bacteria to envrionmental perturbation. ISME Communications, 3 (99). doi: 10.1038/s43705-023-00310-z. [The article has been published OPEN ACCESS with support from SOI].

  • Robert, K., Fornari, D., Veerle, H., Hall, R., Lo Iacono, C., et al. (2023). FKt230918 Cruise Report: September 18th to October 19th, 2023 Puerto Ayora, Santa Cruz Island, Galapagos, Ecuador to Golfito, Costa Rica. Research Report submitted to Galapagos National Park, doi: 10.48336/7sjp-t131.[This report has been published as OPEN ACCESS].

  • Rodriguez-Flores, P., Seid, C., Rouse, G., and Giribet, G. (2023). Cosmopolitan abyssal lineages? A systematic study of East Pacific deep-sea squat lobsters (Decapoda: Galatheoidea Munidopsidae). Invertebrate Systematics, 37 (1), doi: 10.1071/IS22030. [This article has been published as OPEN ACCESS].

  • Schwarzhans, W., and Gerringer, M. (2023). Otoliths of the deepest-living fishes. Deep Sea Research Part I: Oceanographic Research Papers, 198, doi: 10.1016/j.dsr.2023.104079.

  • Stewart, A., Pietsch, T., Moore, J., Peng, X. (2023). Upside-down swimming: in situ observations of inverted orientation of Gigantiactis, with a new depth record for the Ceratioidei. Journal of Fish Biology, doi: 10.1111/jfb.15609.

  • Taviani, M., Foglini, F., Castellan, G., Montagna, P., McCulloch, M., and Trotter, J. (2023). First assessment of anthropogenic impacts in submarine canyon systems off southwestern Australia. Science of the Total Environment, 857 (1), doi: 10.1016/j.scitotenv.2022.159243. [This article has been published as OPEN ACCESS with support from SOI].

  • Vlach, D. (2023). An Illustrated Guide to the Southern California Borderland. California Digital Library, Retrieved from https://escholarship.org/uc/item/1hg7v0q0. [This guide has been published OPEN ACCESS].

  • Wickstein, M. and Conway, K. (2023). The Chirostyloidea of the Northeastern Pacific: Host Associations, Range Extensions and a New Species (Decapoda: Anomura). Zootaxa, 5284 (1), doi:10.11646/zootaxa.5284.1.7.

  • Zhang, D., Zhou, Y., Yen, N., Hiley, A., and Rouse, G. (2023). Ophryotrocha (Dorvilleidae, Polychaeta, Annelida) from deep-sea hydrothermal vents, with the description of five new species, Euoropean Journal of Taxonomy, 864 (1), doi: 10.5852/ejt.2023.864.2101. [This article has been published as OPEN ACCESS].

  • 2022

  • 30 day Preliminary Cruise Report: Interdisciplinary Investigation of the Pesacdero Basin

  • Alalykina, I. and Polyakova, N. (2022). New species of Ophryotrocha (Annelida: Dorvilleidae) Associated with Deep-sea Reducing Habitats in the Bering Sea, Northwest Pacific. Deep Sea Research Part II: Topical Studies in Oceanography, 206, doi: 10.1016/j.dsr2.2022.105217. (This publication describes a new species discovered on Falkor in 2018 and cites the respective DNA sequences). 

  • Beaman, R., Picard, K., and Miller, A. (2022). RV Falkor Surveys in Australia 2020-2021. Oral Presentation and Conference Paper, Hydrospatial 2021 Conference, Australasian Hydrographic Society, Cairns, Australia. [Abstract and presentation are OPEN ACCESS].

  • Blanton, J., Peoples, L., Gerringer, M., Iacuaniello, C., Gallo, N., Linley, T., et al. (2022). Microbiomes of Hadal Fishes across Trench Habitats Contain Similar Taxa and Known Piezophiles. mSphere, 7(2), doi: 10.1128/msphere.00032-22.  [This article is published as OPEN ACCESS].

  • Breusing, C., Castel, J., Yang, Y., Broquet, T., Sun, J., Jollivet, D., et al. (2022). Global 16S rRNA Diversity of Provannid Snail Endosymbionts from Indo-Pacific Deep-sea Hydrothermal Vents. Environmental Microbiology Reports, doi: 10.1111/1758-229.13051. [This article has been published as OPEN ACCESS with support from SOI].

  • Breusing, C., Genetti, M., Russel, S., Corbett-Detig, R., and Beinart, R. (2022). Horizontal Transmission Enables Flexible Associations with Locally Adapted Symbiont Straints in Deep-sea Hydrothermal Vent Symbioses, PNAS, 119 (14), doi: 10.1073/pnas.2115608119. [This article will be available OPEN ACCESS on June 1, 2022 with support from SOI].

  • Breusing, C., Hagen Klobusnik, N., Hauer, M., Beinart, R. (2022). Genome Assembly of the Chemosynthetic Endosymbiont of the Hydrothermal Vent Snail Aliviniconcha adamantis from the Mariana Arc. G3 (Bethesda), 12 (10), doi: 10.1093/g3journal/jkac220. [This article has been published as OPEN ACCESS].

  • Cinay, T., Dumit, D., Woosley, R., Boles, E., Kwiecinski, J., Mullen, S., et al. (2022). Coincident Biogenic Nitrate and pH Maxima Arise in the Upper Anoxic Layer in the Eastern Tropical North Pacific. Global Biogeochemical Cycles, doi: 10.1029/2022GB007470. [This article has been published as OPEN ACCESS].

  • Doan-Nhu, H., Nguyen, T-V., Hoang, D-H., Montoya, J., and Nguyen-Ngoc, L. (2022). Copepods key traits in diverse habitats of tropical waters. Journal of Plankton Research, 44 (1), doi: 10.1093/plankt/fbab088.

  • Durkin, C., Cetinić, I., Estapa, M., Ljubešić, Z., Mucko, J., Neeley, A., and Omand, M. (2022).  Tracing the Path of Carbon Export in the Ocean Through DNA Sequencing of Individual Sinking Particles, The ISME Journal, doi: 10.1038/s41396-022-01239-2. [This article has been published as OPEN ACCESS].

  • Etnoyer, P., Messing, C., Stanley, K., Baumiller, T., Lavelle, K., and Shirley, T. (2022). Diversity and Time-series Analyses of Caribbean deep-sea Coral and Sponge Assemblages on the Tropical Island Slope of Isla de Roatan, Honduras. Marine Biodiversity, 52(8), doi: 10.1007/s12526-021-01255-z. [This article has been published as OPEN ACCESS with support from SOI].

  • Final Project Report: Pinging in the New Year: Mapping the Tasman and Coral Seas

  • Final Project Report: Seafloor to Seabirds in the Coral Sea

  • Final Project Report: Seamounts, Canyons and Reefs of the Coral Sea

  • Holland, N., Hiley, A., and Rouse, G. (2022). A new species of deep-sea torquaratorid enteropneust (Hemichordata): A sequential hermaphrodite with exceptionally wide lips. Invertebrate Biology, doi: 10.111/ivb.12379. [This article is published as OPEN ACCESS with support from SOI].

  • Horowitz, J., Opresko, D., Molodtsova, T., Beaman, R., Cowman, P., and Bridge, T. (2022). Five new species of black coral (Anthozoa; Antipatharia) from the Great Barrier Reef and Coral Sea, Australia. Zootaxa, 5213 (1), doi: 10.1164/zootaxa.5213.1.1. [This article is published as OPEN ACCESS].

  • Hu, S., Smith, A., Anderson, R., Sylva, S., Setzer, M., Steadmon, M., et al. (2022). Globally-distributed Microbial Eukaryotes Exhibit Endemism at Deep-sea Hydrothermal vents. Molecular Ecology, doi: 10.1111/med.16745.

  • Post, A., Przeslawski, R., Nanson, R., Siwabessy, J., Smith, D., Kirkendale, L., and Wilson, N. G. (2022). Modern Dynamics, Morphology and Habitats of Slope-confined Canyons on the Northwest Australian Margin. Marine Geology, 443, doi: 10.1016/j.margeo.2021.106694. [This article has been published as OPEN ACCESS].

  • Przeslawski, R. (2022). Broad distribution of spider-shaped lebensspuren along the Australian continental margin. Frontiers in Marine Science, doi: 10.3389/fmars.2022.1086193. [This article is published as OPEN ACCESS].

  • Przeslawski, R., Christenhusz, M. (2022). Deep-sea Discoveries. Zoological Journal of the Linnean Society, 194 (4), doi: 10.1093/zoolinnean/zlac022. [This article has been published as OPEN ACCESS.]

  • Ramirez-Zerpa, N., Spelz, R., Yarbuh, I., Negrete-Aranda, R., Contreras, J., Clague, D., et al. (2022). Architechture and Tectonostratigraphic Evolution of the Pescadero Basin Complex, Southern Gulf of California: Analysis of High-resolution Bathymetry and Seismic Reflection Profiles, Journal of South American Earth Sciences, 114, doi: 10.1016/j.jsames.2021.103678.

  • Sagorny, C., von Dohren, J., Rouse, G., and Tilic, E. (2022). Cutting the ribbon: bathyal Nemertea from seeps along the Costa Rica margin, with descriptions of 2 new genera and 9 new species. European Journal of Taxonomy, doi: 10.5852/ejt.2022.845.1959.  [This article has been published as OPEN ACCESS].

  • Saunders, J., McIlvin, M., Dupont, C., Kaul, D., Moran, D., Horner, T., et. al. (2022). Microbial Functional Diversity Across Biogeochemical Provinces in the central Pacific Ocean. PNAS, 119 (37), doi: 10.1073/pnas.2200014119.  [This article has been published as OPEN ACCESS].

  • She, M., Weiß, T., Song, Y., Urban, P., Greinert, J., and Köser, K. (2022). Marine Bubble Flow Quantification using Wide-baseline Stereo Photogrammetry. ISPRS Journal of Photogrammetry and Remote Sensing, 190, doi: 10.1016/j.isprsjprs.2022.06.014. [This article has been published OPEN ACCESS].

  • Speed, C., Wilson, N., Somaweera, R., Udyawer, V., Meekan, M., Whisson, C., and Miller, K. (2022). Video surveys of sea snakes in the mesophotic zone shed light on trends in populations. Front. Mar. Sci., doi: 10.3389/fmars.2022.921542. [This article has been published Open Access with support from SOI].

  • Thoram, S., Sager, W., Reed, W., Nakanishi, M., and Zhang, J. (2022). Improved High-Resolution Bathymetry Map of Tamu Massif and Southern Shatsky Rise and its Geological Implications. JGR Solid Earth, 127 (11), doi: 10.1029/2022JB04304.  [This article has been published as OPEN ACCESS].

  • Trotter, J., McCulloch, M., D’Olivo, J., Tisnérat-Laborde, N., Taviani, M., and Montagna, P. (2022).  Deep-water Coral Records of Glacial and Recent Ocean-atmosphere Dynamics from the Perth Canyon in the Southeast Indian Ocean. Quaternary Science Advances, 6, doi: 10.1016/j.qsa.2022.100052. [This articel has been published OPEN ACCESS].

  • Trotter, J., Taviani, M., Foglini, F., Sadekov, A., Skrzypek, G., Mazzoli, C., et al. (2022). Unveiling Deep-sea Habitats of the Southern Ocean-facing Submarine Canyons of Southwestern Australia. Progress in Oceanography, 209, doi: 10.1016/j.pocean.2022.102904. [This article has been published as OPEN ACCESS with support from SOI].

  • Veloso-Alarcón, M., Urban, P., Weiss, T., Köser, K., She, M., and Greinert, J. (2022). Quantitatively Monitoring Bubble-flow at Steep Site Offshore Oregon: Field Trials and Methodological Advances for Parallel Optical and Hydroacoustical Measurements. Frontiers in Earth Science, 10, doi: 10.3389/feart.2022.858992. [This articel has been published as OPEN ACCESS].

  • Wang, H., Wang, W., Liu, M., Zhou, H., Ellwood, M., Butterfield, D., et al. (2022). Iron ligands and isotopes in hydrothermal plumes over backarc volcanoes in the Northeast Lau Basin, Southwest Pacific Ocean. Geochimica et Cosmochimica Acta, 336, doi: 10.1016/j.gca.2022.09.026.

  • Wilson, N., Kirkendale, L., Hosie, A., Moore, G., Rouse, G., Richards, Z., et. al. (2022). An Illustrated Guide to the Fauna of the Ningaloo CanyonsWestern Australian Museum. [The guide has been published as OPEN ACCESS].

  • Wu, F., Speth, D., Philosof, A., Cremiere, A., Narayanan, A., Barco, R., et al. (2022). Unique Mobile Elements and Scalable Gene Flow at the Prokaryote-Eurkaryote Boundary Revealed by Circularized Asgard arcahaea Genomes. Nature Microbiology, doi: 10.1038/s41564-021-01039-y. [This article has been published as OPEN ACCESS with partial support by SOI].

  • Yamada, T., Massot-Campus, M., Prugel-Bennett, A., Pizarro, O., Williams, S., and Thornton, B. (2022). Guiding Labelling Effort for Efficient Learning with Georeferenced Images, IEEE Transactions on Pattern Analysis and Machine Learning, doi: 10.1109/TPAMI.2021.3140060. (Early Access). [This article is published as OPEN ACCESS with support from SOI].

  • Young, H., Murphy, JWA., Friedlander, A., Rotjan, R., Kennedy, BRC., Kikiloi, KS., McCauley, D., Richmond, RH., Maxwell, S., Schaffer, S., Kahoohalahala, S., and Morgan, L. (2022). The Biological and Cultural Significance of Expanding the Pacific Remote Island Marine National Monument.

  • 2021

  • 30 Day Preliminary Cruise Report: Australian Mesophotic Coral Examination

  • 30 Day Preliminary Cruise Report: Biodiverse Borderlands

  • 30 day Preliminary Cruise Report: Designing the Future 2

  • 30 Day Preliminary Cruise Report: Discovering Deep-sea Corals of the Phoenix Islands 2

  • 30 Day Preliminary Cruise Report: Ice Age Geology of the Great Barrier Reef

  • 30 Day Preliminary Cruise Report: Pinging in the New Year